A0A1B0B261 protein (Glossina palpalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1B0B261

Uncharacterized protein. (132 aa)

Predicted Functional Partners:

A0A1B0B4D0

0.705

A0A1B0BGW5

0.630

A0A1B0BGX1

0.630

A0A1B0C082

0.578

A0A1B0AMX9

0.577

A0A1B0C732

0.557

A0A1B0B8F7

0.528

A0A1B0B8H6

0.528

A0A1B0BBK0

0.528

A0A1B0BDI6

0.528

Your Current Organism:

Glossina palpalis

NCBI taxonomy Id: 67801
Other names: G. palpalis gambiensis, Glossina palpalis gambiensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B0AMX9	A0A1B0B261	MADF domain-containing protein.	Uncharacterized protein.	0.577
A0A1B0AMX9	A0A1B0B8F7	MADF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.991
A0A1B0AMX9	A0A1B0B8H6	MADF domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.991
A0A1B0AMX9	A0A1B0BBK0	MADF domain-containing protein.	PINc domain-containing protein.	0.992
A0A1B0AMX9	A0A1B0BDI6	MADF domain-containing protein.	Uncharacterized protein.	0.992
A0A1B0AMX9	A0A1B0C082	MADF domain-containing protein.	Uncharacterized protein.	0.991
A0A1B0B261	A0A1B0AMX9	Uncharacterized protein.	MADF domain-containing protein.	0.577
A0A1B0B261	A0A1B0B4D0	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.705
A0A1B0B261	A0A1B0B8F7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.528
A0A1B0B261	A0A1B0B8H6	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.528
A0A1B0B261	A0A1B0BBK0	Uncharacterized protein.	PINc domain-containing protein.	0.528
A0A1B0B261	A0A1B0BDI6	Uncharacterized protein.	Uncharacterized protein.	0.528
A0A1B0B261	A0A1B0BGW5	Uncharacterized protein.	Uncharacterized protein.	0.630
A0A1B0B261	A0A1B0BGX1	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.630
A0A1B0B261	A0A1B0C082	Uncharacterized protein.	Uncharacterized protein.	0.578
A0A1B0B261	A0A1B0C732	Uncharacterized protein.	Uncharacterized protein.	0.557
A0A1B0B4D0	A0A1B0B261	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.705
A0A1B0B8F7	A0A1B0AMX9	WD_REPEATS_REGION domain-containing protein.	MADF domain-containing protein.	0.991
A0A1B0B8F7	A0A1B0B261	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.528
A0A1B0B8F7	A0A1B0B8H6	WD_REPEATS_REGION domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.998