A0A1B0B3C3 protein (Glossina palpalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1B0B3C3

Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (331 aa)

Predicted Functional Partners:

A0A1B0B3C4

0.916

A0A1B0B5Y9

0.581

A0A1B0AQF5

0.580

A0A1B0B0N5

0.559

A0A1B0ATQ2

0.537

A0A1B0B5Y5

0.493

A0A1B0B0N9

0.484

A0A1B0B5Y6

0.476

A0A1B0B0P0

0.454

A0A1B0B5Z0

0.454

Your Current Organism:

Glossina palpalis

NCBI taxonomy Id: 67801
Other names: G. palpalis gambiensis, Glossina palpalis gambiensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B0AQF5	A0A1B0ATQ2	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Neur_chan_LBD domain-containing protein.	0.580
A0A1B0AQF5	A0A1B0B0N5	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Neur_chan_memb domain-containing protein.	0.626
A0A1B0AQF5	A0A1B0B0N9	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Neur_chan_LBD domain-containing protein.	0.626
A0A1B0AQF5	A0A1B0B0P0	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Neur_chan_LBD domain-containing protein.	0.626
A0A1B0AQF5	A0A1B0B3C3	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.580
A0A1B0AQF5	A0A1B0B3C4	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.580
A0A1B0AQF5	A0A1B0B5Y5	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Neur_chan_memb domain-containing protein.	0.626
A0A1B0AQF5	A0A1B0B5Y6	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.626
A0A1B0AQF5	A0A1B0B5Y9	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Neur_chan_LBD domain-containing protein.	0.626
A0A1B0AQF5	A0A1B0B5Z0	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Neur_chan_LBD domain-containing protein.	0.626
A0A1B0ATQ2	A0A1B0AQF5	Neur_chan_LBD domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.580
A0A1B0ATQ2	A0A1B0B0N5	Neur_chan_LBD domain-containing protein.	Neur_chan_memb domain-containing protein.	0.563
A0A1B0ATQ2	A0A1B0B0N9	Neur_chan_LBD domain-containing protein.	Neur_chan_LBD domain-containing protein.	0.514
A0A1B0ATQ2	A0A1B0B0P0	Neur_chan_LBD domain-containing protein.	Neur_chan_LBD domain-containing protein.	0.454
A0A1B0ATQ2	A0A1B0B3C3	Neur_chan_LBD domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.537
A0A1B0ATQ2	A0A1B0B5Y5	Neur_chan_LBD domain-containing protein.	Neur_chan_memb domain-containing protein.	0.454
A0A1B0ATQ2	A0A1B0B5Y6	Neur_chan_LBD domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.628
A0A1B0ATQ2	A0A1B0B5Y9	Neur_chan_LBD domain-containing protein.	Neur_chan_LBD domain-containing protein.	0.629
A0A1B0ATQ2	A0A1B0B5Z0	Neur_chan_LBD domain-containing protein.	Neur_chan_LBD domain-containing protein.	0.454
A0A1B0B0N5	A0A1B0AQF5	Neur_chan_memb domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.626