A0A1B0BGP2 protein (Glossina palpalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1B0BGP2

RING-type domain-containing protein. (530 aa)

Predicted Functional Partners:

A0A1B0ANW9

0.659

A0A1B0BD35

0.656

A0A1B0B828

0.647

A0A1B0BAS4

0.563

A0A1B0B5R6

0.519

A0A1B0B9N8

0.519

A0A1B0BGS0

0.519

A0A1B0ARA4

0.508

A0A1B0AVL0

0.506

A0A1B0B3E5

0.505

Your Current Organism:

Glossina palpalis

NCBI taxonomy Id: 67801
Other names: G. palpalis gambiensis, Glossina palpalis gambiensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B0ANW9	A0A1B0B3E5	OTU domain-containing protein.	Uncharacterized protein.	0.703
A0A1B0ANW9	A0A1B0B5R6	OTU domain-containing protein.	60S ribosomal protein L40.	0.889
A0A1B0ANW9	A0A1B0B9N8	OTU domain-containing protein.	Ubiquitin-like domain-containing protein.	0.889
A0A1B0ANW9	A0A1B0BAS4	OTU domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.746
A0A1B0ANW9	A0A1B0BD35	OTU domain-containing protein.	Ubiquitin-like domain-containing protein.	0.933
A0A1B0ANW9	A0A1B0BGP2	OTU domain-containing protein.	RING-type domain-containing protein.	0.659
A0A1B0ANW9	A0A1B0BGS0	OTU domain-containing protein.	Ubiquitin-like domain-containing protein.	0.889
A0A1B0ARA4	A0A1B0AVL0	Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	AH domain-containing protein.	0.504
A0A1B0ARA4	A0A1B0BGP2	Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	RING-type domain-containing protein.	0.508
A0A1B0AVL0	A0A1B0ARA4	AH domain-containing protein.	Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	0.504
A0A1B0AVL0	A0A1B0BGP2	AH domain-containing protein.	RING-type domain-containing protein.	0.506
A0A1B0B3E5	A0A1B0ANW9	Uncharacterized protein.	OTU domain-containing protein.	0.703
A0A1B0B3E5	A0A1B0B5R6	Uncharacterized protein.	60S ribosomal protein L40.	0.709
A0A1B0B3E5	A0A1B0B9N8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.709
A0A1B0B3E5	A0A1B0BAS4	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.851
A0A1B0B3E5	A0A1B0BD35	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.722
A0A1B0B3E5	A0A1B0BGP2	Uncharacterized protein.	RING-type domain-containing protein.	0.505
A0A1B0B3E5	A0A1B0BGS0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.709
A0A1B0B5R6	A0A1B0ANW9	60S ribosomal protein L40.	OTU domain-containing protein.	0.889
A0A1B0B5R6	A0A1B0B3E5	60S ribosomal protein L40.	Uncharacterized protein.	0.709