STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B0BIV7Uncharacterized protein. (395 aa)    
Predicted Functional Partners:
A0A1B0B158
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.829
A0A1B0AXB7
KH domain-containing protein.
   
 0.699
A0A1B0AXB8
Uncharacterized protein.
   
 0.699
A0A1B0BLH4
Uncharacterized protein.
   
 0.665
A0A1B0C093
RRM domain-containing protein.
   
 0.664
A0A1B0BKP0
Uncharacterized protein.
   
 0.662
A0A1B0BNJ5
Uncharacterized protein.
   
 0.655
A0A1B0C0B1
CSD_1 domain-containing protein.
   
 0.653
A0A1B0AMX9
MADF domain-containing protein.
   
   0.643
A0A1B0BL63
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
    
  0.640
Your Current Organism:
Glossina palpalis
NCBI taxonomy Id: 67801
Other names: G. palpalis gambiensis, Glossina palpalis gambiensis
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