STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B0BKW5RBR-type E3 ubiquitin transferase. (506 aa)    
Predicted Functional Partners:
A0A1B0AMJ0
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.929
A0A1B0BD35
Ubiquitin-like domain-containing protein.
    
 0.917
A0A1B0AUR8
Ubiquitin-like domain-containing protein.
    
 0.910
A0A1B0C5C5
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.859
A0A1B0B142
RING-type domain-containing protein.
    
 0.838
A0A1B0B1A4
RING-type domain-containing protein.
    
 0.838
A0A1B0BNV9
Uncharacterized protein.
    
 0.797
A0A1B0BNW0
Uncharacterized protein.
    
 0.797
A0A1B0B5R6
60S ribosomal protein L40.
    
  0.767
A0A1B0B9N8
Ubiquitin-like domain-containing protein.
    
  0.767
Your Current Organism:
Glossina palpalis
NCBI taxonomy Id: 67801
Other names: G. palpalis gambiensis, Glossina palpalis gambiensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.