Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A1B0AWE8 | A0A1B0AWZ2 | 40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. | Ribosomal_L7Ae domain-containing protein. | 0.999 |
A0A1B0AWE8 | A0A1B0B1W7 | 40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. | TruB_N domain-containing protein. | 0.956 |
A0A1B0AWE8 | A0A1B0BUX5 | 40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.947 |
A0A1B0AWE8 | A0A1B0C1U8 | 40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.948 |
A0A1B0AWE8 | A0A1B0C6A9 | 40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. | Uncharacterized protein. | 0.665 |
A0A1B0AWZ2 | A0A1B0AWE8 | Ribosomal_L7Ae domain-containing protein. | 40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. | 0.999 |
A0A1B0AWZ2 | A0A1B0B1W7 | Ribosomal_L7Ae domain-containing protein. | TruB_N domain-containing protein. | 0.956 |
A0A1B0AWZ2 | A0A1B0C086 | Ribosomal_L7Ae domain-containing protein. | Uncharacterized protein. | 0.988 |
A0A1B0AWZ2 | A0A1B0C1U8 | Ribosomal_L7Ae domain-containing protein. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.948 |
A0A1B0AWZ2 | A0A1B0C2T1 | Ribosomal_L7Ae domain-containing protein. | Uncharacterized protein. | 0.988 |
A0A1B0AWZ2 | A0A1B0C6A9 | Ribosomal_L7Ae domain-containing protein. | Uncharacterized protein. | 0.665 |
A0A1B0B1W7 | A0A1B0AWE8 | TruB_N domain-containing protein. | 40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. | 0.956 |
A0A1B0B1W7 | A0A1B0AWZ2 | TruB_N domain-containing protein. | Ribosomal_L7Ae domain-containing protein. | 0.956 |
A0A1B0B1W7 | A0A1B0B8H1 | TruB_N domain-containing protein. | Regulator of telomere elongation helicase 1 homolog; ATP-dependent DNA helicase implicated in DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. | 0.582 |
A0A1B0B1W7 | A0A1B0BUX5 | TruB_N domain-containing protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.956 |
A0A1B0B1W7 | A0A1B0BWM5 | TruB_N domain-containing protein. | Ribosomal_L7Ae domain-containing protein. | 0.956 |
A0A1B0B1W7 | A0A1B0C086 | TruB_N domain-containing protein. | Uncharacterized protein. | 0.956 |
A0A1B0B1W7 | A0A1B0C1U8 | TruB_N domain-containing protein. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.999 |
A0A1B0B1W7 | A0A1B0C218 | TruB_N domain-containing protein. | Uncharacterized protein. | 0.956 |
A0A1B0B1W7 | A0A1B0C2T1 | TruB_N domain-containing protein. | Uncharacterized protein. | 0.956 |
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