Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KMK51947.1Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)    
Predicted Functional Partners:
KMK51949.1
Tail fiber protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
KMK51948.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.988
KMK50618.1
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.963
KMK50612.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
KMK50619.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
KMK50613.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.932
KMK50549.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.872
KMK50719.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.865
KMK50715.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.862
KMK50717.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.853
Your Current Organism:
Muribacter muris
NCBI taxonomy Id: 67855
Other names: ATCC 49577, Ackerman 80-443D, Actinobacillus muris, CCUG 16938, CCUG 23134, CCUG 28285 B, CIP 103439, DSM 22206, M. muris, MCCM 00197, MCCM:00197, NCTC 12432, strain 80-443D, strain HIM 728-7/8, strain HIM 733-8
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