STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK51550.1RNA polymerase subunit sigma-32; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)    
Predicted Functional Partners:
KMK51551.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.727
KMK50951.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.632
thiQ
Thiamine ABC transporter ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
       0.547
KMK51553.1
Thiamine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.547
KMK52466.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
KMK51974.1
Dihydroneopterin triphosphate pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
KMK50457.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
KMK50454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
KMK50512.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.408
Your Current Organism:
Muribacter muris
NCBI taxonomy Id: 67855
Other names: ATCC 49577, Ackerman 80-443D, Actinobacillus muris, CCUG 16938, CCUG 23134, CCUG 28285 B, CIP 103439, DSM 22206, M. muris, MCCM 00197, MCCM:00197, NCTC 12432, strain 80-443D, strain HIM 728-7/8, strain HIM 733-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.