STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK50820.1Lsg locus protein 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)    
Predicted Functional Partners:
KMK51139.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.901
KMK50825.1
Amylovoran biosynthesis protein AmsE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.823
KMK50822.1
Lsg locus protein 4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.818
KMK50824.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.793
KMK50823.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.791
KMK50821.1
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2, 3-sialyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
KMK51947.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
    
  0.726
KMK50613.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.724
KMK51138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.689
Your Current Organism:
Muribacter muris
NCBI taxonomy Id: 67855
Other names: ATCC 49577, Ackerman 80-443D, Actinobacillus muris, CCUG 16938, CCUG 23134, CCUG 28285 B, CIP 103439, DSM 22206, M. muris, MCCM 00197, MCCM:00197, NCTC 12432, strain 80-443D, strain HIM 728-7/8, strain HIM 733-8
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