Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMK50727.1 | KMK50728.1 | RO21_10195 | RO21_10205 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | 0.989 |
| KMK50727.1 | KMK50729.1 | RO21_10195 | RO21_10210 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.983 |
| KMK50727.1 | KMK50731.1 | RO21_10195 | RO21_10200 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.995 |
| KMK50727.1 | KMK51144.1 | RO21_10195 | RO21_08030 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.978 |
| KMK50727.1 | KMK51146.1 | RO21_10195 | RO21_08040 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitrate reductase; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. | 0.877 |
| KMK50727.1 | KMK51412.1 | RO21_10195 | RO21_06305 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitrite reductase; 4Fe4S subunit; may be involved in the transfer of electrons from quinones to the c-type cytochromes; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.905 |
| KMK50727.1 | KMK51773.1 | RO21_10195 | RO21_04365 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.784 |
| KMK50727.1 | fdhD | RO21_10195 | RO21_10190 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate dehydrogenase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.762 |
| KMK50727.1 | fdhE | RO21_10195 | RO21_10215 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate dehydrogenase; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | 0.943 |
| KMK50727.1 | napD | RO21_10195 | RO21_08020 | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Reductase; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. | 0.889 |
| KMK50728.1 | KMK50727.1 | RO21_10205 | RO21_10195 | Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| KMK50728.1 | KMK50729.1 | RO21_10205 | RO21_10210 | Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
| KMK50728.1 | KMK50731.1 | RO21_10205 | RO21_10200 | Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.993 |
| KMK50728.1 | KMK51773.1 | RO21_10205 | RO21_04365 | Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.712 |
| KMK50728.1 | fdhD | RO21_10205 | RO21_10190 | Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | Formate dehydrogenase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.650 |
| KMK50728.1 | fdhE | RO21_10205 | RO21_10215 | Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | Formate dehydrogenase; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | 0.912 |
| KMK50729.1 | KMK50727.1 | RO21_10210 | RO21_10195 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.983 |
| KMK50729.1 | KMK50728.1 | RO21_10210 | RO21_10205 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. | 0.995 |
| KMK50729.1 | KMK50731.1 | RO21_10210 | RO21_10200 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.990 |
| KMK50729.1 | KMK51144.1 | RO21_10210 | RO21_08030 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Quinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.968 |
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