STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK50476.1Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)    
Predicted Functional Partners:
KMK50477.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.919
KMK50478.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.915
KMK50520.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.780
KMK50462.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.764
KMK51480.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.752
KMK51481.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.740
KMK50647.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.719
KMK50646.1
Portal vertex protein; gpQ; Q protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; Q is a connector or portal protein that joins phage head and tail; Q, P and M proteins are needed to package DNA into proheads and for the conversion of proheads to capsids; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.711
KMK50463.1
Phage head protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.709
KMK50412.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.708
Your Current Organism:
Muribacter muris
NCBI taxonomy Id: 67855
Other names: ATCC 49577, Ackerman 80-443D, Actinobacillus muris, CCUG 16938, CCUG 23134, CCUG 28285 B, CIP 103439, DSM 22206, M. muris, MCCM 00197, MCCM:00197, NCTC 12432, strain 80-443D, strain HIM 728-7/8, strain HIM 733-8
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