STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA91736.1Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. (292 aa)    
Predicted Functional Partners:
EFA91735.1
Hypothetical protein.
 
    0.889
EFA91737.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
   0.858
EFA91738.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
   0.815
EFA91734.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
   0.807
EFA93082.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
    0.774
EFA92689.1
Glycosyltransferase, group 2 family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; identified by match to protein family HMM PF00535.
  
     0.773
EFA92905.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
     0.761
EFA91732.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
    
0.709
EFA91730.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943.
 
    0.631
EFA91733.1
Hypothetical protein.
  
    0.604
Your Current Organism:
Prevotella buccalis
NCBI taxonomy Id: 679190
Other names: P. buccalis ATCC 35310, Prevotella buccalis ATCC 35310, Prevotella buccalis str. ATCC 35310, Prevotella buccalis strain ATCC 35310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.