STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA91741.1Bacterial sugar transferase; Identified by match to protein family HMM PF02397. (205 aa)    
Predicted Functional Partners:
EFA91274.1
Chain length determinant protein; Identified by match to protein family HMM PF02706; match to protein family HMM TIGR01007.
 
 
 0.924
EFA91748.1
Identified by match to protein family HMM PF01041; match to protein family HMM PF01212; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.875
EFA91743.1
ATP-grasp domain protein; Identified by match to protein family HMM PF02655.
 
   
 0.873
EFA91738.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
 0.864
EFA91740.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01370.
  
  
 0.812
EFA91742.1
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein; Identified by match to protein family HMM PF00278; match to protein family HMM PF02784.
       0.794
EFA91737.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
  
 0.696
EFA91749.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321.
 
 
 0.656
EFA91744.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.630
EFA91735.1
Hypothetical protein.
  
  
 0.627
Your Current Organism:
Prevotella buccalis
NCBI taxonomy Id: 679190
Other names: P. buccalis ATCC 35310, Prevotella buccalis ATCC 35310, Prevotella buccalis str. ATCC 35310, Prevotella buccalis strain ATCC 35310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.