Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFA90993.1 | EFA92802.1 | HMPREF0650_1198 | HMPREF0650_0272 | YbbR-like protein. | Hypothetical protein. | 0.477 |
| EFA90993.1 | EFA92959.1 | HMPREF0650_1198 | HMPREF0650_1684 | YbbR-like protein. | Hypothetical protein. | 0.695 |
| EFA90993.1 | EFA93047.1 | HMPREF0650_1198 | HMPREF0650_1083 | YbbR-like protein. | Hypothetical protein. | 0.461 |
| EFA90993.1 | EFA93062.1 | HMPREF0650_1198 | HMPREF0650_0448 | YbbR-like protein. | Hypothetical protein. | 0.669 |
| EFA92797.1 | EFA92798.1 | HMPREF0650_0267 | HMPREF0650_0268 | Hypothetical protein. | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | 0.475 |
| EFA92797.1 | EFA92800.1 | HMPREF0650_0267 | HMPREF0650_0270 | Hypothetical protein. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. | 0.646 |
| EFA92797.1 | EFA92802.1 | HMPREF0650_0267 | HMPREF0650_0272 | Hypothetical protein. | Hypothetical protein. | 0.557 |
| EFA92797.1 | recF | HMPREF0650_0267 | HMPREF0650_0271 | Hypothetical protein. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.557 |
| EFA92797.1 | ribH | HMPREF0650_0267 | HMPREF0650_0269 | Hypothetical protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.646 |
| EFA92798.1 | EFA92797.1 | HMPREF0650_0268 | HMPREF0650_0267 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | Hypothetical protein. | 0.475 |
| EFA92798.1 | EFA92800.1 | HMPREF0650_0268 | HMPREF0650_0270 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. | 0.774 |
| EFA92798.1 | EFA92802.1 | HMPREF0650_0268 | HMPREF0650_0272 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | Hypothetical protein. | 0.514 |
| EFA92798.1 | recF | HMPREF0650_0268 | HMPREF0650_0271 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.545 |
| EFA92798.1 | ribH | HMPREF0650_0268 | HMPREF0650_0269 | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.774 |
| EFA92800.1 | EFA92797.1 | HMPREF0650_0270 | HMPREF0650_0267 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. | Hypothetical protein. | 0.646 |
| EFA92800.1 | EFA92798.1 | HMPREF0650_0270 | HMPREF0650_0268 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. | Putative DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929. | 0.774 |
| EFA92800.1 | EFA92802.1 | HMPREF0650_0270 | HMPREF0650_0272 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. | Hypothetical protein. | 0.671 |
| EFA92800.1 | EFA93062.1 | HMPREF0650_0270 | HMPREF0650_0448 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. | Hypothetical protein. | 0.553 |
| EFA92800.1 | recF | HMPREF0650_0270 | HMPREF0650_0271 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.671 |
| EFA92800.1 | ribH | HMPREF0650_0270 | HMPREF0650_0269 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.849 |
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