Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFA91670.1 | EFA92595.1 | HMPREF0650_2358 | HMPREF0650_1344 | Hypothetical protein. | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | 0.477 |
EFA91670.1 | EFA92675.1 | HMPREF0650_2358 | HMPREF0650_1424 | Hypothetical protein. | Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. | 0.553 |
EFA91670.1 | EFA92836.1 | HMPREF0650_2358 | HMPREF0650_0308 | Hypothetical protein. | Hypothetical protein. | 0.587 |
EFA91670.1 | EFA92839.1 | HMPREF0650_2358 | HMPREF0650_0311 | Hypothetical protein. | Phage lysozyme; Identified by match to protein family HMM PF00959. | 0.723 |
EFA91670.1 | EFA92840.1 | HMPREF0650_2358 | HMPREF0650_0312 | Hypothetical protein. | Hypothetical protein. | 0.762 |
EFA91670.1 | EFA92841.1 | HMPREF0650_2358 | HMPREF0650_0313 | Hypothetical protein. | Conjugative transposon protein TraO. | 0.774 |
EFA91670.1 | traM-2 | HMPREF0650_2358 | HMPREF0650_0315 | Hypothetical protein. | Conjugative transposon TraM protein; Identified by match to protein family HMM TIGR03779; Bacteroides conjugative transposon TraM protein. | 0.767 |
EFA92595.1 | EFA91670.1 | HMPREF0650_1344 | HMPREF0650_2358 | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | Hypothetical protein. | 0.477 |
EFA92595.1 | EFA92836.1 | HMPREF0650_1344 | HMPREF0650_0308 | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | Hypothetical protein. | 0.519 |
EFA92595.1 | EFA92839.1 | HMPREF0650_1344 | HMPREF0650_0311 | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | Phage lysozyme; Identified by match to protein family HMM PF00959. | 0.650 |
EFA92595.1 | EFA92840.1 | HMPREF0650_1344 | HMPREF0650_0312 | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | Hypothetical protein. | 0.509 |
EFA92595.1 | EFA92841.1 | HMPREF0650_1344 | HMPREF0650_0313 | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | Conjugative transposon protein TraO. | 0.437 |
EFA92595.1 | EFA92855.1 | HMPREF0650_1344 | HMPREF0650_0327 | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | Hypothetical protein. | 0.516 |
EFA92595.1 | EFA93052.1 | HMPREF0650_1344 | HMPREF0650_1088 | DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764. | Hypothetical protein. | 0.407 |
EFA92675.1 | EFA91670.1 | HMPREF0650_1424 | HMPREF0650_2358 | Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. | Hypothetical protein. | 0.553 |
EFA92675.1 | EFA92751.1 | HMPREF0650_1424 | HMPREF0650_0875 | Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. | Hypothetical protein. | 0.766 |
EFA92675.1 | EFA92836.1 | HMPREF0650_1424 | HMPREF0650_0308 | Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. | Hypothetical protein. | 0.503 |
EFA92675.1 | EFA92839.1 | HMPREF0650_1424 | HMPREF0650_0311 | Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. | Phage lysozyme; Identified by match to protein family HMM PF00959. | 0.679 |
EFA92675.1 | EFA92840.1 | HMPREF0650_1424 | HMPREF0650_0312 | Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. | Hypothetical protein. | 0.416 |
EFA92675.1 | EFA92841.1 | HMPREF0650_1424 | HMPREF0650_0313 | Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. | Conjugative transposon protein TraO. | 0.528 |
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