STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA92531.1Hypothetical protein. (248 aa)    
Predicted Functional Partners:
EFA92532.1
Hypothetical protein.
 
     0.961
EFA92533.1
Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702.
 
     0.960
EFA92530.1
Hypothetical protein.
 
     0.941
EFA93296.1
Hypothetical protein.
  
     0.726
EFA92175.1
Hypothetical protein.
  
     0.516
EFA93264.1
Hypothetical protein.
 
     0.503
EFA91306.1
Hypothetical protein.
 
     0.476
EFA91281.1
Identified by match to protein family HMM PF07313.
  
  
 0.463
EFA91208.1
Hypothetical protein.
  
     0.434
EFA91481.1
Identified by match to protein family HMM TIGR03519; Bacteroidetes-specific.
  
     0.427
Your Current Organism:
Prevotella buccalis
NCBI taxonomy Id: 679190
Other names: P. buccalis ATCC 35310, Prevotella buccalis ATCC 35310, Prevotella buccalis str. ATCC 35310, Prevotella buccalis strain ATCC 35310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.