Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFA92551.1 | EFA92552.1 | HMPREF0650_1299 | HMPREF0650_1300 | Hypothetical protein. | CHC2 zinc finger domain protein; Identified by match to protein family HMM PF01807. | 0.871 |
EFA92551.1 | EFA92553.1 | HMPREF0650_1299 | HMPREF0650_1301 | Hypothetical protein. | Hypothetical protein. | 0.949 |
EFA92551.1 | EFA92559.1 | HMPREF0650_1299 | HMPREF0650_1307 | Hypothetical protein. | Hypothetical protein. | 0.885 |
EFA92551.1 | EFA92562.1 | HMPREF0650_1299 | HMPREF0650_1310 | Hypothetical protein. | Hypothetical protein. | 0.830 |
EFA92551.1 | EFA92563.1 | HMPREF0650_1299 | HMPREF0650_1311 | Hypothetical protein. | Conjugative transposon protein TraE. | 0.617 |
EFA92551.1 | EFA92567.1 | HMPREF0650_1299 | HMPREF0650_1315 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.805 |
EFA92551.1 | traJ-2 | HMPREF0650_1299 | HMPREF0650_1306 | Hypothetical protein. | Conjugative transposon TraJ protein; Identified by match to protein family HMM PF07863; match to protein family HMM TIGR03782; Bacteroides conjugative transposon TraJ protein. | 0.720 |
EFA92551.1 | traK-3 | HMPREF0650_1299 | HMPREF0650_1305 | Hypothetical protein. | Conjugative transposon TraK protein; Identified by match to protein family HMM TIGR03781; Bacteroides conjugative transposon TraK protein. | 0.726 |
EFA92551.1 | traM-3 | HMPREF0650_1299 | HMPREF0650_1303 | Hypothetical protein. | Conjugative transposon TraM protein; Identified by match to protein family HMM TIGR03779; Bacteroides conjugative transposon TraM protein. | 0.906 |
EFA92551.1 | traN-3 | HMPREF0650_1299 | HMPREF0650_1302 | Hypothetical protein. | Conjugative transposon TraN protein; Identified by match to protein family HMM TIGR03780; Bacteroides conjugative transposon TraN protein. | 0.932 |
EFA92552.1 | EFA92551.1 | HMPREF0650_1300 | HMPREF0650_1299 | CHC2 zinc finger domain protein; Identified by match to protein family HMM PF01807. | Hypothetical protein. | 0.871 |
EFA92552.1 | EFA92553.1 | HMPREF0650_1300 | HMPREF0650_1301 | CHC2 zinc finger domain protein; Identified by match to protein family HMM PF01807. | Hypothetical protein. | 0.899 |
EFA92552.1 | EFA92559.1 | HMPREF0650_1300 | HMPREF0650_1307 | CHC2 zinc finger domain protein; Identified by match to protein family HMM PF01807. | Hypothetical protein. | 0.542 |
EFA92552.1 | traJ-2 | HMPREF0650_1300 | HMPREF0650_1306 | CHC2 zinc finger domain protein; Identified by match to protein family HMM PF01807. | Conjugative transposon TraJ protein; Identified by match to protein family HMM PF07863; match to protein family HMM TIGR03782; Bacteroides conjugative transposon TraJ protein. | 0.469 |
EFA92552.1 | traK-3 | HMPREF0650_1300 | HMPREF0650_1305 | CHC2 zinc finger domain protein; Identified by match to protein family HMM PF01807. | Conjugative transposon TraK protein; Identified by match to protein family HMM TIGR03781; Bacteroides conjugative transposon TraK protein. | 0.530 |
EFA92552.1 | traM-3 | HMPREF0650_1300 | HMPREF0650_1303 | CHC2 zinc finger domain protein; Identified by match to protein family HMM PF01807. | Conjugative transposon TraM protein; Identified by match to protein family HMM TIGR03779; Bacteroides conjugative transposon TraM protein. | 0.838 |
EFA92552.1 | traN-3 | HMPREF0650_1300 | HMPREF0650_1302 | CHC2 zinc finger domain protein; Identified by match to protein family HMM PF01807. | Conjugative transposon TraN protein; Identified by match to protein family HMM TIGR03780; Bacteroides conjugative transposon TraN protein. | 0.831 |
EFA92553.1 | EFA92551.1 | HMPREF0650_1301 | HMPREF0650_1299 | Hypothetical protein. | Hypothetical protein. | 0.949 |
EFA92553.1 | EFA92552.1 | HMPREF0650_1301 | HMPREF0650_1300 | Hypothetical protein. | CHC2 zinc finger domain protein; Identified by match to protein family HMM PF01807. | 0.899 |
EFA92553.1 | EFA92559.1 | HMPREF0650_1301 | HMPREF0650_1307 | Hypothetical protein. | Hypothetical protein. | 0.869 |
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