STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (230 aa)    
Predicted Functional Partners:
EFA92908.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
 0.987
EFA91225.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
 0.936
EFA92259.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
 0.936
EFA92909.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
 0.901
EFA91823.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
 
 0.821
EFA91824.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
 
 0.821
EFA91822.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
 0.796
EFA91826.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
 0.796
EFA92085.1
Hypothetical protein; Belongs to the CvfB family.
       0.794
EFA91017.1
Hypothetical protein.
   
 
 0.692
Your Current Organism:
Prevotella buccalis
NCBI taxonomy Id: 679190
Other names: P. buccalis ATCC 35310, Prevotella buccalis ATCC 35310, Prevotella buccalis str. ATCC 35310, Prevotella buccalis strain ATCC 35310
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