STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA92386.1Glycosyl hydrolase family 20, catalytic domain protein; Identified by match to protein family HMM PF00728. (675 aa)    
Predicted Functional Partners:
EFA91232.1
O-GlcNAcase BT_4395; Identified by match to protein family HMM PF00754; match to protein family HMM PF07555.
 
  
  0.784
araE
Arabinose-proton symporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.709
EFA92388.1
Tat pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.
       0.668
EFA92528.1
Glycosyl hydrolase family 20, catalytic domain protein; Identified by match to protein family HMM PF00728; match to protein family HMM PF00754.
  
  
 
0.648
EFA92309.1
Glycosyl hydrolase family 20, catalytic domain protein; Identified by match to protein family HMM PF00728.
  
  
 
0.645
EFA91088.1
Glycosyl hydrolase family 2, sugar binding domain protein; Identified by match to protein family HMM PF00703; match to protein family HMM PF00754; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.639
EFA91006.1
F5/8 type C domain protein; Identified by match to protein family HMM PF00754.
 
   
 0.566
EFA90951.1
BNR/Asp-box repeat protein; Identified by match to protein family HMM PF02012.
 
 
 0.550
EFA93126.1
Arylsulfatase; Identified by match to protein family HMM PF00884.
  
 
  0.545
EFA91423.1
Alpha-galactosidase; Identified by match to protein family HMM PF02065; match to protein family HMM PF02837; match to protein family HMM PF05345.
  
  
 0.535
Your Current Organism:
Prevotella buccalis
NCBI taxonomy Id: 679190
Other names: P. buccalis ATCC 35310, Prevotella buccalis ATCC 35310, Prevotella buccalis str. ATCC 35310, Prevotella buccalis strain ATCC 35310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.