STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA92397.1FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. (634 aa)    
Predicted Functional Partners:
EFA92395.1
Tat pathway signal sequence domain protein.
 
    0.936
EFA92396.1
N-acylglucosamine 2-epimerase; Identified by match to protein family HMM PF07221.
 
    0.912
etfB
Electron transfer flavoprotein domain protein; Identified by match to protein family HMM PF01012.
  
 
 0.890
tonB_2-7
TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
     0.821
EFA92388.1
Tat pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.
 
    0.811
EFA92393.1
SusD family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07980.
 
     0.808
EFA92391.1
Identified by match to protein family HMM PF02638.
 
     0.804
etfA
Electron transfer flavoprotein FAD-binding domain protein; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012.
  
 
 0.802
EFA92390.1
Identified by match to protein family HMM PF02638.
     0.722
EFA92026.1
Hypothetical protein.
  
     0.583
Your Current Organism:
Prevotella buccalis
NCBI taxonomy Id: 679190
Other names: P. buccalis ATCC 35310, Prevotella buccalis ATCC 35310, Prevotella buccalis str. ATCC 35310, Prevotella buccalis strain ATCC 35310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.