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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA92404.1N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. (461 aa)    
Predicted Functional Partners:
EFA92403.1
Identified by match to protein family HMM PF02470.
       0.787
folB
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.748
EFA92406.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
       0.748
EFA91189.1
Peptidase, S54 family; Identified by match to protein family HMM PF01694.
  
   0.678
EFA92407.1
Identified by match to protein family HMM PF00881; Belongs to the flavin oxidoreductase frp family.
  
    0.626
EFA93063.1
Identified by match to protein family HMM PF06835.
   
 0.606
EFA91017.1
Hypothetical protein.
    
   0.601
EFA91265.1
Hypothetical protein.
    
   0.601
EFA90864.1
Peptidase, M23 family; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.
 
  
 0.582
EFA90943.1
Peptidase, M23 family; Identified by match to protein family HMM PF01551.
 
  
 0.577
Your Current Organism:
Prevotella buccalis
NCBI taxonomy Id: 679190
Other names: P. buccalis ATCC 35310, Prevotella buccalis ATCC 35310, Prevotella buccalis str. ATCC 35310, Prevotella buccalis strain ATCC 35310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.