STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC05822.1ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
EFC05821.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.999
EFC05820.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 0.997
EFC05823.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; Belongs to the ABC transporter superfamily.
 
 
0.996
EFC05819.1
ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496.
 
 0.995
EFC06293.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; Identified by match to protein family HMM PF00005.
 
    
0.900
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     
0.900
EFC06254.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    
0.888
EFC06136.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    
0.717
EFC06325.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
  
 0.688
EFC05680.1
Cobalt transport protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02361.
  
 
0.655
Your Current Organism:
Bulleidia extructa
NCBI taxonomy Id: 679192
Other names: B. extructa W1219, Bulleidia extructa W1219, Bulleidia extructa str. W1219, Bulleidia extructa strain W1219
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