Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05124.1 | EFC05917.1 | HMPREF9013_0402 | HMPREF9013_0116 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Hypothetical protein; Identified by glimmer; putative. | 0.634 |
| EFC05124.1 | EFC05918.1 | HMPREF9013_0402 | HMPREF9013_0117 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.932 |
| EFC05839.1 | EFC05841.1 | HMPREF9013_0031 | HMPREF9013_0033 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.900 |
| EFC05839.1 | EFC05916.1 | HMPREF9013_0031 | HMPREF9013_0115 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | FMN-binding domain protein; Identified by match to protein family HMM PF00890; match to protein family HMM PF04205. | 0.522 |
| EFC05839.1 | EFC05918.1 | HMPREF9013_0031 | HMPREF9013_0117 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.626 |
| EFC05839.1 | rnfC | HMPREF9013_0031 | HMPREF9013_0032 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.826 |
| EFC05841.1 | EFC05839.1 | HMPREF9013_0033 | HMPREF9013_0031 | NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.900 |
| EFC05841.1 | EFC05918.1 | HMPREF9013_0033 | HMPREF9013_0117 | NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.524 |
| EFC05841.1 | rnfC | HMPREF9013_0033 | HMPREF9013_0032 | NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.999 |
| EFC05907.1 | EFC05918.1 | HMPREF9013_0106 | HMPREF9013_0117 | Hypothetical protein; Identified by glimmer; putative. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.411 |
| EFC05916.1 | EFC05839.1 | HMPREF9013_0115 | HMPREF9013_0031 | FMN-binding domain protein; Identified by match to protein family HMM PF00890; match to protein family HMM PF04205. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.522 |
| EFC05916.1 | EFC05917.1 | HMPREF9013_0115 | HMPREF9013_0116 | FMN-binding domain protein; Identified by match to protein family HMM PF00890; match to protein family HMM PF04205. | Hypothetical protein; Identified by glimmer; putative. | 0.512 |
| EFC05916.1 | EFC05918.1 | HMPREF9013_0115 | HMPREF9013_0117 | FMN-binding domain protein; Identified by match to protein family HMM PF00890; match to protein family HMM PF04205. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.496 |
| EFC05917.1 | EFC05124.1 | HMPREF9013_0116 | HMPREF9013_0402 | Hypothetical protein; Identified by glimmer; putative. | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.634 |
| EFC05917.1 | EFC05916.1 | HMPREF9013_0116 | HMPREF9013_0115 | Hypothetical protein; Identified by glimmer; putative. | FMN-binding domain protein; Identified by match to protein family HMM PF00890; match to protein family HMM PF04205. | 0.512 |
| EFC05917.1 | EFC05918.1 | HMPREF9013_0116 | HMPREF9013_0117 | Hypothetical protein; Identified by glimmer; putative. | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | 0.900 |
| EFC05918.1 | EFC05124.1 | HMPREF9013_0117 | HMPREF9013_0402 | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.932 |
| EFC05918.1 | EFC05839.1 | HMPREF9013_0117 | HMPREF9013_0031 | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.626 |
| EFC05918.1 | EFC05841.1 | HMPREF9013_0117 | HMPREF9013_0033 | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.524 |
| EFC05918.1 | EFC05907.1 | HMPREF9013_0117 | HMPREF9013_0106 | Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. | Hypothetical protein; Identified by glimmer; putative. | 0.411 |
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