Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05728.1 | dnaJ | HMPREF9013_0651 | HMPREF9013_0217 | Putative HTH-type transcriptional regulator CueR. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.908 |
| EFC05728.1 | dnaK | HMPREF9013_0651 | HMPREF9013_0216 | Putative HTH-type transcriptional regulator CueR. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.554 |
| EFC05728.1 | grpE | HMPREF9013_0651 | HMPREF9013_0215 | Putative HTH-type transcriptional regulator CueR. | Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...] | 0.459 |
| EFC05728.1 | hrcA | HMPREF9013_0651 | HMPREF9013_0214 | Putative HTH-type transcriptional regulator CueR. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.491 |
| EFC06010.1 | clpB | HMPREF9013_0213 | HMPREF9013_0218 | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702. | Putative ATP-dependent chaperone protein ClpB; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; Belongs to the ClpA/ClpB family. | 0.401 |
| EFC06010.1 | dnaJ | HMPREF9013_0213 | HMPREF9013_0217 | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.587 |
| EFC06010.1 | dnaK | HMPREF9013_0213 | HMPREF9013_0216 | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.515 |
| EFC06010.1 | grpE | HMPREF9013_0213 | HMPREF9013_0215 | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702. | Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...] | 0.520 |
| EFC06010.1 | hrcA | HMPREF9013_0213 | HMPREF9013_0214 | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.515 |
| EFC06346.1 | dnaJ | HMPREF9013_1054 | HMPREF9013_0217 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.969 |
| EFC06346.1 | dnaK | HMPREF9013_1054 | HMPREF9013_0216 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.998 |
| EFC06346.1 | groL | HMPREF9013_1054 | HMPREF9013_0653 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.894 |
| EFC06346.1 | groS | HMPREF9013_1054 | HMPREF9013_0654 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.752 |
| EFC06346.1 | grpE | HMPREF9013_1054 | HMPREF9013_0215 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...] | 0.760 |
| EFC06346.1 | hrcA | HMPREF9013_1054 | HMPREF9013_0214 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.534 |
| clpB | EFC06010.1 | HMPREF9013_0218 | HMPREF9013_0213 | Putative ATP-dependent chaperone protein ClpB; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; Belongs to the ClpA/ClpB family. | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702. | 0.401 |
| clpB | dnaJ | HMPREF9013_0218 | HMPREF9013_0217 | Putative ATP-dependent chaperone protein ClpB; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; Belongs to the ClpA/ClpB family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.971 |
| clpB | dnaK | HMPREF9013_0218 | HMPREF9013_0216 | Putative ATP-dependent chaperone protein ClpB; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; Belongs to the ClpA/ClpB family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.987 |
| clpB | groL | HMPREF9013_0218 | HMPREF9013_0653 | Putative ATP-dependent chaperone protein ClpB; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; Belongs to the ClpA/ClpB family. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.700 |
| clpB | groS | HMPREF9013_0218 | HMPREF9013_0654 | Putative ATP-dependent chaperone protein ClpB; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; Belongs to the ClpA/ClpB family. | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.712 |
page 1 of 4