Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05536.1 | EFC05537.1 | HMPREF9013_1239 | HMPREF9013_1240 | Cobalt transport protein; Identified by match to protein family HMM PF02361. | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | 0.949 |
| EFC05536.1 | EFC06024.1 | HMPREF9013_1239 | HMPREF9013_0227 | Cobalt transport protein; Identified by match to protein family HMM PF02361. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.573 |
| EFC05536.1 | EFC06025.1 | HMPREF9013_1239 | HMPREF9013_0228 | Cobalt transport protein; Identified by match to protein family HMM PF02361. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463. | 0.515 |
| EFC05536.1 | ecfA | HMPREF9013_1239 | HMPREF9013_0946 | Cobalt transport protein; Identified by match to protein family HMM PF02361. | ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.911 |
| EFC05537.1 | EFC05536.1 | HMPREF9013_1240 | HMPREF9013_1239 | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.949 |
| EFC05537.1 | EFC06024.1 | HMPREF9013_1240 | HMPREF9013_0227 | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.578 |
| EFC05537.1 | EFC06025.1 | HMPREF9013_1240 | HMPREF9013_0228 | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463. | 0.509 |
| EFC05537.1 | EFC06143.1 | HMPREF9013_1240 | HMPREF9013_0838 | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.778 |
| EFC05733.1 | EFC06024.1 | HMPREF9013_0656 | HMPREF9013_0227 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.563 |
| EFC05733.1 | EFC06028.1 | HMPREF9013_0656 | HMPREF9013_0231 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.576 |
| EFC05733.1 | potA | HMPREF9013_0656 | HMPREF9013_0642 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.766 |
| EFC06024.1 | EFC05536.1 | HMPREF9013_0227 | HMPREF9013_1239 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.573 |
| EFC06024.1 | EFC05537.1 | HMPREF9013_0227 | HMPREF9013_1240 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185. | 0.578 |
| EFC06024.1 | EFC05733.1 | HMPREF9013_0227 | HMPREF9013_0656 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.563 |
| EFC06024.1 | EFC06025.1 | HMPREF9013_0227 | HMPREF9013_0228 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463. | 0.818 |
| EFC06024.1 | EFC06028.1 | HMPREF9013_0227 | HMPREF9013_0231 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.742 |
| EFC06024.1 | EFC06143.1 | HMPREF9013_0227 | HMPREF9013_0838 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.647 |
| EFC06024.1 | EFC06293.1 | HMPREF9013_0227 | HMPREF9013_1000 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Putative bacteriocin export ABC transporter, lactococcin 972 group; Identified by match to protein family HMM PF00005. | 0.573 |
| EFC06024.1 | EFC06346.1 | HMPREF9013_0227 | HMPREF9013_1054 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ATPase, AAA family; Identified by match to protein family HMM PF00004. | 0.720 |
| EFC06024.1 | ecfA | HMPREF9013_0227 | HMPREF9013_0946 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.893 |
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