STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC05679.1Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. (206 aa)    
Predicted Functional Partners:
EFC05681.1
Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185.
 
     0.926
EFC05680.1
Cobalt transport protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02361.
 
     0.865
EFC06024.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
     0.558
EFC06025.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463.
  
     0.557
EFC05749.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
  
     0.524
EFC05544.1
Hypothetical protein.
  
     0.522
EFC05748.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
     0.512
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 
 0.483
EFC06144.1
Conserved hypothetical protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185.
 
  
 0.476
EFC05678.1
Hypothetical protein; Identified by glimmer; putative.
       0.413
Your Current Organism:
Bulleidia extructa
NCBI taxonomy Id: 679192
Other names: B. extructa W1219, Bulleidia extructa W1219, Bulleidia extructa str. W1219, Bulleidia extructa strain W1219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.