Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05169.1 | EFC05170.1 | HMPREF9013_0450 | HMPREF9013_0451 | Hypothetical protein. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.773 |
| EFC05169.1 | EFC05171.1 | HMPREF9013_0450 | HMPREF9013_0452 | Hypothetical protein. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.773 |
| EFC05169.1 | EFC05172.1 | HMPREF9013_0450 | HMPREF9013_0453 | Hypothetical protein. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.408 |
| EFC05170.1 | EFC05169.1 | HMPREF9013_0451 | HMPREF9013_0450 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Hypothetical protein. | 0.773 |
| EFC05170.1 | EFC05171.1 | HMPREF9013_0451 | HMPREF9013_0452 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.875 |
| EFC05170.1 | EFC05172.1 | HMPREF9013_0451 | HMPREF9013_0453 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.721 |
| EFC05170.1 | EFC05175.1 | HMPREF9013_0451 | HMPREF9013_0456 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.598 |
| EFC05170.1 | potA | HMPREF9013_0451 | HMPREF9013_0642 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.796 |
| EFC05171.1 | EFC05169.1 | HMPREF9013_0452 | HMPREF9013_0450 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | Hypothetical protein. | 0.773 |
| EFC05171.1 | EFC05170.1 | HMPREF9013_0452 | HMPREF9013_0451 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.875 |
| EFC05171.1 | EFC05172.1 | HMPREF9013_0452 | HMPREF9013_0453 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.594 |
| EFC05171.1 | EFC05175.1 | HMPREF9013_0452 | HMPREF9013_0456 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.483 |
| EFC05171.1 | EFC05348.1 | HMPREF9013_0452 | HMPREF9013_1372 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | 0.466 |
| EFC05171.1 | EFC06028.1 | HMPREF9013_0452 | HMPREF9013_0231 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.528 |
| EFC05171.1 | EFC06293.1 | HMPREF9013_0452 | HMPREF9013_1000 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | Putative bacteriocin export ABC transporter, lactococcin 972 group; Identified by match to protein family HMM PF00005. | 0.709 |
| EFC05171.1 | potA | HMPREF9013_0452 | HMPREF9013_0642 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.502 |
| EFC05172.1 | EFC05169.1 | HMPREF9013_0453 | HMPREF9013_0450 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Hypothetical protein. | 0.408 |
| EFC05172.1 | EFC05170.1 | HMPREF9013_0453 | HMPREF9013_0451 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.721 |
| EFC05172.1 | EFC05171.1 | HMPREF9013_0453 | HMPREF9013_0452 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.594 |
| EFC05172.1 | EFC05348.1 | HMPREF9013_0453 | HMPREF9013_1372 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | 0.523 |
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