STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC05261.1PPIC-type PPIASE domain protein; Identified by match to protein family HMM PF00639. (326 aa)    
Predicted Functional Partners:
EFC05262.1
Hypothetical protein.
 
     0.956
EFC05333.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.846
EFC05263.1
Histidine triad domain protein; Identified by match to protein family HMM PF01230.
  
 
 0.838
EFC05244.1
Putative cell division protein FtsA.
 
 
 
 0.814
nifJ
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
 
 0.798
EFC05257.1
SUF system FeS assembly protein, NifU family; Identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994.
  
  
 0.759
EFC05674.1
Putative septation ring formation regulator EzrA.
  
     0.741
EFC05766.1
Hypothetical protein.
 
    0.701
EFC05461.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF01381.
  
     0.682
EFC05696.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.673
Your Current Organism:
Bulleidia extructa
NCBI taxonomy Id: 679192
Other names: B. extructa W1219, Bulleidia extructa W1219, Bulleidia extructa str. W1219, Bulleidia extructa strain W1219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.