Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05339.1 | EFC05715.1 | HMPREF9013_1364 | HMPREF9013_0638 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | HD domain protein; Identified by match to protein family HMM PF01966. | 0.579 |
| EFC05339.1 | EFC05720.1 | HMPREF9013_1364 | HMPREF9013_0643 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | 0.427 |
| EFC05339.1 | cdd | HMPREF9013_1364 | HMPREF9013_0515 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.907 |
| EFC05339.1 | deoD | HMPREF9013_1364 | HMPREF9013_0160 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.948 |
| EFC05339.1 | tdk | HMPREF9013_1364 | HMPREF9013_0262 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Thymidine kinase; Identified by match to protein family HMM PF00265. | 0.586 |
| EFC05715.1 | EFC05339.1 | HMPREF9013_0638 | HMPREF9013_1364 | HD domain protein; Identified by match to protein family HMM PF01966. | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.579 |
| EFC05715.1 | EFC05716.1 | HMPREF9013_0638 | HMPREF9013_0639 | HD domain protein; Identified by match to protein family HMM PF01966. | ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. | 0.655 |
| EFC05715.1 | EFC05717.1 | HMPREF9013_0638 | HMPREF9013_0640 | HD domain protein; Identified by match to protein family HMM PF01966. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.655 |
| EFC05715.1 | EFC05718.1 | HMPREF9013_0638 | HMPREF9013_0641 | HD domain protein; Identified by match to protein family HMM PF01966. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.655 |
| EFC05715.1 | EFC05720.1 | HMPREF9013_0638 | HMPREF9013_0643 | HD domain protein; Identified by match to protein family HMM PF01966. | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | 0.657 |
| EFC05715.1 | cdd | HMPREF9013_0638 | HMPREF9013_0515 | HD domain protein; Identified by match to protein family HMM PF01966. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.557 |
| EFC05715.1 | deoD | HMPREF9013_0638 | HMPREF9013_0160 | HD domain protein; Identified by match to protein family HMM PF01966. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.562 |
| EFC05715.1 | potA | HMPREF9013_0638 | HMPREF9013_0642 | HD domain protein; Identified by match to protein family HMM PF01966. | Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.671 |
| EFC05715.1 | tdk | HMPREF9013_0638 | HMPREF9013_0262 | HD domain protein; Identified by match to protein family HMM PF01966. | Thymidine kinase; Identified by match to protein family HMM PF00265. | 0.555 |
| EFC05715.1 | tmk | HMPREF9013_0638 | HMPREF9013_1083 | HD domain protein; Identified by match to protein family HMM PF01966. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.569 |
| EFC05716.1 | EFC05715.1 | HMPREF9013_0639 | HMPREF9013_0638 | ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. | HD domain protein; Identified by match to protein family HMM PF01966. | 0.655 |
| EFC05716.1 | EFC05717.1 | HMPREF9013_0639 | HMPREF9013_0640 | ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.999 |
| EFC05716.1 | EFC05718.1 | HMPREF9013_0639 | HMPREF9013_0641 | ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.999 |
| EFC05716.1 | EFC05720.1 | HMPREF9013_0639 | HMPREF9013_0643 | ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. | DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | 0.831 |
| EFC05716.1 | potA | HMPREF9013_0639 | HMPREF9013_0642 | ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. | Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.999 |
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