STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptsHPhosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. (88 aa)    
Predicted Functional Partners:
ptsP
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
 0.998
EFC05489.1
PRD domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05043.
   
 0.991
EFC06299.1
PTS system, mannose/fructose/sorbose family, IIB component; Identified by match to protein family HMM PF03830; match to protein family HMM TIGR00854.
  
 0.978
EFC06301.1
PTS system fructose IIA component; Identified by match to protein family HMM PF03610.
  
 0.978
EFC06522.1
PTS system, Lactose/Cellobiose specific IIA subunit; Identified by match to protein family HMM PF02255.
   
 0.976
EFC06440.1
Hypothetical protein.
  
 
 0.963
EFC05712.1
PTS system, glucose-like IIB component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826.
  
 
 0.958
ptbA
PTS system, glucose subfamily, IIA component; Identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830.
  
 0.956
EFC05488.1
PRD domain protein; Overlaps another CDS with the same product name.
  
 0.951
EFC05268.1
PTS system, mannose/fructose/sorbose family, IIB component; Identified by match to protein family HMM PF03830.
  
 0.944
Your Current Organism:
Bulleidia extructa
NCBI taxonomy Id: 679192
Other names: B. extructa W1219, Bulleidia extructa W1219, Bulleidia extructa str. W1219, Bulleidia extructa strain W1219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.