Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05297.1 | EFC06194.1 | HMPREF9013_0581 | HMPREF9013_0896 | Identified by match to protein family HMM PF00149; Belongs to the 5'-nucleotidase family. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | 0.522 |
| EFC05297.1 | tdk | HMPREF9013_0581 | HMPREF9013_0262 | Identified by match to protein family HMM PF00149; Belongs to the 5'-nucleotidase family. | Thymidine kinase; Identified by match to protein family HMM PF00265. | 0.569 |
| EFC05297.1 | tmk | HMPREF9013_0581 | HMPREF9013_1083 | Identified by match to protein family HMM PF00149; Belongs to the 5'-nucleotidase family. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.605 |
| EFC05628.1 | EFC06194.1 | HMPREF9013_1332 | HMPREF9013_0896 | Carboxylesterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | 0.636 |
| EFC05649.1 | EFC06194.1 | HMPREF9013_0254 | HMPREF9013_0896 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | 0.589 |
| EFC05881.1 | EFC05882.1 | HMPREF9013_0076 | HMPREF9013_0077 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.999 |
| EFC05881.1 | EFC06194.1 | HMPREF9013_0076 | HMPREF9013_0896 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | 0.637 |
| EFC05881.1 | tdk | HMPREF9013_0076 | HMPREF9013_0262 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Thymidine kinase; Identified by match to protein family HMM PF00265. | 0.593 |
| EFC05881.1 | tmk | HMPREF9013_0076 | HMPREF9013_1083 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.960 |
| EFC05882.1 | EFC05881.1 | HMPREF9013_0077 | HMPREF9013_0076 | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.999 |
| EFC05882.1 | EFC06194.1 | HMPREF9013_0077 | HMPREF9013_0896 | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | 0.566 |
| EFC05882.1 | tmk | HMPREF9013_0077 | HMPREF9013_1083 | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.940 |
| EFC06193.1 | EFC06194.1 | HMPREF9013_0895 | HMPREF9013_0896 | Identified by match to protein family HMM PF01554. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | 0.726 |
| EFC06193.1 | EFC06195.1 | HMPREF9013_0895 | HMPREF9013_0897 | Identified by match to protein family HMM PF01554. | Hypothetical protein. | 0.536 |
| EFC06193.1 | EFC06196.1 | HMPREF9013_0895 | HMPREF9013_0898 | Identified by match to protein family HMM PF01554. | Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.554 |
| EFC06194.1 | EFC05297.1 | HMPREF9013_0896 | HMPREF9013_0581 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | Identified by match to protein family HMM PF00149; Belongs to the 5'-nucleotidase family. | 0.522 |
| EFC06194.1 | EFC05628.1 | HMPREF9013_0896 | HMPREF9013_1332 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | Carboxylesterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | 0.636 |
| EFC06194.1 | EFC05649.1 | HMPREF9013_0896 | HMPREF9013_0254 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | 0.589 |
| EFC06194.1 | EFC05881.1 | HMPREF9013_0896 | HMPREF9013_0076 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.637 |
| EFC06194.1 | EFC05882.1 | HMPREF9013_0896 | HMPREF9013_0077 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690. | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.566 |
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