STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC06291.1Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (218 aa)    
Predicted Functional Partners:
EFC06292.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 0.993
EFC06361.1
Histidine kinase A domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 0.948
EFC05160.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
 0.928
EFC05887.1
Putative sensor histidine kinase CssS; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 0.917
EFC06294.1
Hypothetical protein.
 
   
 0.875
EFC06293.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; Identified by match to protein family HMM PF00005.
 
   
 0.865
nifJ
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
 
 0.830
EFC06369.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
 
 0.814
EFC06133.1
Histidine kinase A domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672.
 
 0.798
EFC06093.1
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.
 
  
 0.700
Your Current Organism:
Bulleidia extructa
NCBI taxonomy Id: 679192
Other names: B. extructa W1219, Bulleidia extructa W1219, Bulleidia extructa str. W1219, Bulleidia extructa strain W1219
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.