Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC06332.1 | EFC06333.1 | HMPREF9013_1040 | HMPREF9013_1041 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.588 |
| EFC06332.1 | EFC06334.1 | HMPREF9013_1040 | HMPREF9013_1042 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM PF01027; Belongs to the BI1 family. | 0.506 |
| EFC06333.1 | EFC06332.1 | HMPREF9013_1041 | HMPREF9013_1040 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.588 |
| EFC06333.1 | EFC06334.1 | HMPREF9013_1041 | HMPREF9013_1042 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM PF01027; Belongs to the BI1 family. | 0.658 |
| EFC06333.1 | miaA | HMPREF9013_1041 | HMPREF9013_1043 | Hypothetical protein; Identified by glimmer; putative. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.481 |
| EFC06333.1 | mutL | HMPREF9013_1041 | HMPREF9013_1044 | Hypothetical protein; Identified by glimmer; putative. | DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.481 |
| EFC06334.1 | EFC06332.1 | HMPREF9013_1042 | HMPREF9013_1040 | Identified by match to protein family HMM PF01027; Belongs to the BI1 family. | Hypothetical protein; Identified by glimmer; putative. | 0.506 |
| EFC06334.1 | EFC06333.1 | HMPREF9013_1042 | HMPREF9013_1041 | Identified by match to protein family HMM PF01027; Belongs to the BI1 family. | Hypothetical protein; Identified by glimmer; putative. | 0.658 |
| EFC06334.1 | miaA | HMPREF9013_1042 | HMPREF9013_1043 | Identified by match to protein family HMM PF01027; Belongs to the BI1 family. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.598 |
| EFC06334.1 | mutL | HMPREF9013_1042 | HMPREF9013_1044 | Identified by match to protein family HMM PF01027; Belongs to the BI1 family. | DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.559 |
| miaA | EFC06333.1 | HMPREF9013_1043 | HMPREF9013_1041 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Hypothetical protein; Identified by glimmer; putative. | 0.481 |
| miaA | EFC06334.1 | HMPREF9013_1043 | HMPREF9013_1042 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Identified by match to protein family HMM PF01027; Belongs to the BI1 family. | 0.598 |
| miaA | mutL | HMPREF9013_1043 | HMPREF9013_1044 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.948 |
| mutL | EFC06333.1 | HMPREF9013_1044 | HMPREF9013_1041 | DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Hypothetical protein; Identified by glimmer; putative. | 0.481 |
| mutL | EFC06334.1 | HMPREF9013_1044 | HMPREF9013_1042 | DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Identified by match to protein family HMM PF01027; Belongs to the BI1 family. | 0.559 |
| mutL | miaA | HMPREF9013_1044 | HMPREF9013_1043 | DNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.948 |