Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05474.1 | EFC05475.1 | HMPREF9013_1179 | HMPREF9013_1180 | Identified by match to protein family HMM PF01797. | Hypothetical protein; Identified by glimmer; putative. | 0.459 |
| EFC05475.1 | EFC05474.1 | HMPREF9013_1180 | HMPREF9013_1179 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM PF01797. | 0.459 |
| EFC05475.1 | rplJ | HMPREF9013_1180 | HMPREF9013_1182 | Hypothetical protein; Identified by glimmer; putative. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.451 |
| EFC05475.1 | rplL | HMPREF9013_1180 | HMPREF9013_1183 | Hypothetical protein; Identified by glimmer; putative. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.430 |
| rplJ | EFC05475.1 | HMPREF9013_1182 | HMPREF9013_1180 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Hypothetical protein; Identified by glimmer; putative. | 0.451 |
| rplJ | rplL | HMPREF9013_1182 | HMPREF9013_1183 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.999 |
| rplL | EFC05475.1 | HMPREF9013_1183 | HMPREF9013_1180 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Hypothetical protein; Identified by glimmer; putative. | 0.430 |
| rplL | rplJ | HMPREF9013_1183 | HMPREF9013_1182 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |