Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05519.1 | EFC05521.1 | HMPREF9013_1222 | HMPREF9013_1224 | Hypothetical protein. | Hypothetical protein. | 0.648 |
| EFC05519.1 | EFC05523.1 | HMPREF9013_1222 | HMPREF9013_1226 | Hypothetical protein. | Identified by match to protein family HMM PF03389. | 0.547 |
| EFC05519.1 | EFC05531.1 | HMPREF9013_1222 | HMPREF9013_1234 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.638 |
| EFC05519.1 | EFC05539.1 | HMPREF9013_1222 | HMPREF9013_1242 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.649 |
| EFC05521.1 | EFC05519.1 | HMPREF9013_1224 | HMPREF9013_1222 | Hypothetical protein. | Hypothetical protein. | 0.648 |
| EFC05521.1 | EFC05523.1 | HMPREF9013_1224 | HMPREF9013_1226 | Hypothetical protein. | Identified by match to protein family HMM PF03389. | 0.909 |
| EFC05521.1 | EFC05531.1 | HMPREF9013_1224 | HMPREF9013_1234 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.541 |
| EFC05521.1 | EFC05539.1 | HMPREF9013_1224 | HMPREF9013_1242 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.646 |
| EFC05521.1 | EFC05540.1 | HMPREF9013_1224 | HMPREF9013_1243 | Hypothetical protein. | Resolvase, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.470 |
| EFC05523.1 | EFC05519.1 | HMPREF9013_1226 | HMPREF9013_1222 | Identified by match to protein family HMM PF03389. | Hypothetical protein. | 0.547 |
| EFC05523.1 | EFC05521.1 | HMPREF9013_1226 | HMPREF9013_1224 | Identified by match to protein family HMM PF03389. | Hypothetical protein. | 0.909 |
| EFC05523.1 | EFC05531.1 | HMPREF9013_1226 | HMPREF9013_1234 | Identified by match to protein family HMM PF03389. | RNA polymerase sigma factor, sigma-70 family. | 0.597 |
| EFC05523.1 | EFC05539.1 | HMPREF9013_1226 | HMPREF9013_1242 | Identified by match to protein family HMM PF03389. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.767 |
| EFC05523.1 | EFC05540.1 | HMPREF9013_1226 | HMPREF9013_1243 | Identified by match to protein family HMM PF03389. | Resolvase, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.560 |
| EFC05531.1 | EFC05519.1 | HMPREF9013_1234 | HMPREF9013_1222 | RNA polymerase sigma factor, sigma-70 family. | Hypothetical protein. | 0.638 |
| EFC05531.1 | EFC05521.1 | HMPREF9013_1234 | HMPREF9013_1224 | RNA polymerase sigma factor, sigma-70 family. | Hypothetical protein. | 0.541 |
| EFC05531.1 | EFC05523.1 | HMPREF9013_1234 | HMPREF9013_1226 | RNA polymerase sigma factor, sigma-70 family. | Identified by match to protein family HMM PF03389. | 0.597 |
| EFC05531.1 | EFC05539.1 | HMPREF9013_1234 | HMPREF9013_1242 | RNA polymerase sigma factor, sigma-70 family. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.663 |
| EFC05531.1 | EFC05540.1 | HMPREF9013_1234 | HMPREF9013_1243 | RNA polymerase sigma factor, sigma-70 family. | Resolvase, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.546 |
| EFC05538.1 | EFC05539.1 | HMPREF9013_1241 | HMPREF9013_1242 | Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.655 |
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