EFC05548.1 protein (Bulleidia extructa) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

EFC05548.1

TraG family protein. (189 aa)

Predicted Functional Partners:

EFC05517.1

0.976

EFC05541.1

0.976

EFC05549.1

0.924

EFC05540.1

0.890

EFC05550.1

0.879

tnpX

0.872

EFC05539.1

0.854

EFC05513.1

0.810

EFC05551.1

0.808

EFC05515.1

0.780

Your Current Organism:

Bulleidia extructa

NCBI taxonomy Id: 679192
Other names: B. extructa W1219, Bulleidia extructa W1219, Bulleidia extructa str. W1219, Bulleidia extructa strain W1219

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFC05513.1	EFC05515.1	HMPREF9013_1216	HMPREF9013_1218	Hypothetical protein.	Hypothetical protein.	0.881
EFC05513.1	EFC05517.1	HMPREF9013_1216	HMPREF9013_1220	Hypothetical protein.	Hypothetical protein.	0.845
EFC05513.1	EFC05541.1	HMPREF9013_1216	HMPREF9013_1244	Hypothetical protein.	Hypothetical protein.	0.838
EFC05513.1	EFC05548.1	HMPREF9013_1216	HMPREF9013_1251	Hypothetical protein.	TraG family protein.	0.810
EFC05515.1	EFC05513.1	HMPREF9013_1218	HMPREF9013_1216	Hypothetical protein.	Hypothetical protein.	0.881
EFC05515.1	EFC05517.1	HMPREF9013_1218	HMPREF9013_1220	Hypothetical protein.	Hypothetical protein.	0.842
EFC05515.1	EFC05541.1	HMPREF9013_1218	HMPREF9013_1244	Hypothetical protein.	Hypothetical protein.	0.807
EFC05515.1	EFC05548.1	HMPREF9013_1218	HMPREF9013_1251	Hypothetical protein.	TraG family protein.	0.780
EFC05515.1	EFC05549.1	HMPREF9013_1218	HMPREF9013_1252	Hypothetical protein.	Hypothetical protein.	0.674
EFC05517.1	EFC05513.1	HMPREF9013_1220	HMPREF9013_1216	Hypothetical protein.	Hypothetical protein.	0.845
EFC05517.1	EFC05515.1	HMPREF9013_1220	HMPREF9013_1218	Hypothetical protein.	Hypothetical protein.	0.842
EFC05517.1	EFC05541.1	HMPREF9013_1220	HMPREF9013_1244	Hypothetical protein.	Hypothetical protein.	0.978
EFC05517.1	EFC05548.1	HMPREF9013_1220	HMPREF9013_1251	Hypothetical protein.	TraG family protein.	0.976
EFC05539.1	EFC05540.1	HMPREF9013_1242	HMPREF9013_1243	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Resolvase, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00239; match to protein family HMM PF07508.	0.989
EFC05539.1	EFC05541.1	HMPREF9013_1242	HMPREF9013_1244	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein.	0.946
EFC05539.1	EFC05548.1	HMPREF9013_1242	HMPREF9013_1251	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	TraG family protein.	0.854
EFC05540.1	EFC05539.1	HMPREF9013_1243	HMPREF9013_1242	Resolvase, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00239; match to protein family HMM PF07508.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.989
EFC05540.1	EFC05541.1	HMPREF9013_1243	HMPREF9013_1244	Resolvase, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00239; match to protein family HMM PF07508.	Hypothetical protein.	0.967
EFC05540.1	EFC05548.1	HMPREF9013_1243	HMPREF9013_1251	Resolvase, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00239; match to protein family HMM PF07508.	TraG family protein.	0.890
EFC05541.1	EFC05513.1	HMPREF9013_1244	HMPREF9013_1216	Hypothetical protein.	Hypothetical protein.	0.838