Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05574.1 | EFC05575.1 | HMPREF9013_1277 | HMPREF9013_1278 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.429 |
| EFC05575.1 | EFC05574.1 | HMPREF9013_1278 | HMPREF9013_1277 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.429 |
| EFC05575.1 | EFC05576.1 | HMPREF9013_1278 | HMPREF9013_1279 | Hypothetical protein; Identified by glimmer; putative. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | 0.658 |
| EFC05575.1 | EFC05577.1 | HMPREF9013_1278 | HMPREF9013_1280 | Hypothetical protein; Identified by glimmer; putative. | Putative bacteriocin transport accessory protein. | 0.418 |
| EFC05575.1 | EFC05578.1 | HMPREF9013_1278 | HMPREF9013_1281 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.416 |
| EFC05575.1 | EFC05579.1 | HMPREF9013_1278 | HMPREF9013_1282 | Hypothetical protein; Identified by glimmer; putative. | Hexose kinase, 1-phosphofructokinase family; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.416 |
| EFC05575.1 | pepT | HMPREF9013_1278 | HMPREF9013_1283 | Hypothetical protein; Identified by glimmer; putative. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.416 |
| EFC05576.1 | EFC05575.1 | HMPREF9013_1279 | HMPREF9013_1278 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | Hypothetical protein; Identified by glimmer; putative. | 0.658 |
| EFC05576.1 | EFC05577.1 | HMPREF9013_1279 | HMPREF9013_1280 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | Putative bacteriocin transport accessory protein. | 0.481 |
| EFC05576.1 | EFC05578.1 | HMPREF9013_1279 | HMPREF9013_1281 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | Hypothetical protein; Identified by glimmer; putative. | 0.478 |
| EFC05576.1 | EFC05579.1 | HMPREF9013_1279 | HMPREF9013_1282 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | Hexose kinase, 1-phosphofructokinase family; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.491 |
| EFC05576.1 | pepT | HMPREF9013_1279 | HMPREF9013_1283 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.586 |
| EFC05577.1 | EFC05575.1 | HMPREF9013_1280 | HMPREF9013_1278 | Putative bacteriocin transport accessory protein. | Hypothetical protein; Identified by glimmer; putative. | 0.418 |
| EFC05577.1 | EFC05576.1 | HMPREF9013_1280 | HMPREF9013_1279 | Putative bacteriocin transport accessory protein. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | 0.481 |
| EFC05577.1 | EFC05578.1 | HMPREF9013_1280 | HMPREF9013_1281 | Putative bacteriocin transport accessory protein. | Hypothetical protein; Identified by glimmer; putative. | 0.768 |
| EFC05577.1 | EFC05579.1 | HMPREF9013_1280 | HMPREF9013_1282 | Putative bacteriocin transport accessory protein. | Hexose kinase, 1-phosphofructokinase family; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.769 |
| EFC05577.1 | pepT | HMPREF9013_1280 | HMPREF9013_1283 | Putative bacteriocin transport accessory protein. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.775 |
| EFC05578.1 | EFC05575.1 | HMPREF9013_1281 | HMPREF9013_1278 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.416 |
| EFC05578.1 | EFC05576.1 | HMPREF9013_1281 | HMPREF9013_1279 | Hypothetical protein; Identified by glimmer; putative. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241. | 0.478 |
| EFC05578.1 | EFC05577.1 | HMPREF9013_1281 | HMPREF9013_1280 | Hypothetical protein; Identified by glimmer; putative. | Putative bacteriocin transport accessory protein. | 0.768 |
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