Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05729.1 | EFC06449.1 | HMPREF9013_0652 | HMPREF9013_1394 | Hypothetical protein; Identified by glimmer; putative. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.808 |
| EFC05803.1 | EFC06449.1 | HMPREF9013_0728 | HMPREF9013_1394 | Hypothetical protein; Identified by glimmer; putative. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.808 |
| EFC05905.1 | EFC06449.1 | HMPREF9013_0104 | HMPREF9013_1394 | Hypothetical protein; Identified by glimmer; putative. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.808 |
| EFC05994.1 | EFC06309.1 | HMPREF9013_0197 | HMPREF9013_1016 | Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; Belongs to the glycosyl hydrolase 13 family. | Cell wall-binding repeat protein; Identified by match to protein family HMM PF01473. | 0.877 |
| EFC05994.1 | EFC06449.1 | HMPREF9013_0197 | HMPREF9013_1394 | Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; Belongs to the glycosyl hydrolase 13 family. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.851 |
| EFC05994.1 | glgA | HMPREF9013_0197 | HMPREF9013_0196 | Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; Belongs to the glycosyl hydrolase 13 family. | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.997 |
| EFC05994.1 | nagB | HMPREF9013_0197 | HMPREF9013_0645 | Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; Belongs to the glycosyl hydrolase 13 family. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.589 |
| EFC06115.1 | EFC06449.1 | HMPREF9013_0810 | HMPREF9013_1394 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.807 |
| EFC06309.1 | EFC05994.1 | HMPREF9013_1016 | HMPREF9013_0197 | Cell wall-binding repeat protein; Identified by match to protein family HMM PF01473. | Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; Belongs to the glycosyl hydrolase 13 family. | 0.877 |
| EFC06309.1 | EFC06449.1 | HMPREF9013_1016 | HMPREF9013_1394 | Cell wall-binding repeat protein; Identified by match to protein family HMM PF01473. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.595 |
| EFC06448.1 | EFC06449.1 | HMPREF9013_1393 | HMPREF9013_1394 | 6-O-methylguanine DNA methyltransferase, DNA binding domain protein; Identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.666 |
| EFC06449.1 | EFC05729.1 | HMPREF9013_1394 | HMPREF9013_0652 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Hypothetical protein; Identified by glimmer; putative. | 0.808 |
| EFC06449.1 | EFC05803.1 | HMPREF9013_1394 | HMPREF9013_0728 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Hypothetical protein; Identified by glimmer; putative. | 0.808 |
| EFC06449.1 | EFC05905.1 | HMPREF9013_1394 | HMPREF9013_0104 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Hypothetical protein; Identified by glimmer; putative. | 0.808 |
| EFC06449.1 | EFC05994.1 | HMPREF9013_1394 | HMPREF9013_0197 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; Belongs to the glycosyl hydrolase 13 family. | 0.851 |
| EFC06449.1 | EFC06115.1 | HMPREF9013_1394 | HMPREF9013_0810 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | 0.807 |
| EFC06449.1 | EFC06309.1 | HMPREF9013_1394 | HMPREF9013_1016 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Cell wall-binding repeat protein; Identified by match to protein family HMM PF01473. | 0.595 |
| EFC06449.1 | EFC06448.1 | HMPREF9013_1394 | HMPREF9013_1393 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 6-O-methylguanine DNA methyltransferase, DNA binding domain protein; Identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589. | 0.666 |
| EFC06449.1 | glgA | HMPREF9013_1394 | HMPREF9013_0196 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.634 |
| EFC06449.1 | murG | HMPREF9013_1394 | HMPREF9013_0420 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.565 |
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