Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC05339.1 | EFC05450.1 | HMPREF9013_1364 | HMPREF9013_0387 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | 0.569 |
| EFC05339.1 | EFC06452.1 | HMPREF9013_1364 | HMPREF9013_1397 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Identified by match to protein family HMM PF00485. | 0.635 |
| EFC05339.1 | deoD | HMPREF9013_1364 | HMPREF9013_0160 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.948 |
| EFC05339.1 | guaA | HMPREF9013_1364 | HMPREF9013_1351 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.680 |
| EFC05339.1 | pyrR | HMPREF9013_1364 | HMPREF9013_0983 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Phosphoribosyl transferase domain protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.867 |
| EFC05339.1 | rpiB | HMPREF9013_1364 | HMPREF9013_0865 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Ribose-5-phosphate isomerase B; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120. | 0.524 |
| EFC05339.1 | udk | HMPREF9013_1364 | HMPREF9013_0367 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uridine kinase; Identified by match to protein family HMM PF00485; match to protein family HMM TIGR00235. | 0.628 |
| EFC05339.1 | udp | HMPREF9013_1364 | HMPREF9013_0121 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.667 |
| EFC05339.1 | upp | HMPREF9013_1364 | HMPREF9013_1437 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.921 |
| EFC05450.1 | EFC05339.1 | HMPREF9013_0387 | HMPREF9013_1364 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.569 |
| EFC05450.1 | EFC06452.1 | HMPREF9013_0387 | HMPREF9013_1397 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | Identified by match to protein family HMM PF00485. | 0.928 |
| EFC05450.1 | deoD | HMPREF9013_0387 | HMPREF9013_0160 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.891 |
| EFC05450.1 | guaA | HMPREF9013_0387 | HMPREF9013_1351 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | 0.933 |
| EFC05450.1 | pyrH | HMPREF9013_0387 | HMPREF9013_0730 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.892 |
| EFC05450.1 | pyrR | HMPREF9013_0387 | HMPREF9013_0983 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | Phosphoribosyl transferase domain protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.888 |
| EFC05450.1 | udk | HMPREF9013_0387 | HMPREF9013_0367 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | Uridine kinase; Identified by match to protein family HMM PF00485; match to protein family HMM TIGR00235. | 0.844 |
| EFC05450.1 | udp | HMPREF9013_0387 | HMPREF9013_0121 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.851 |
| EFC05450.1 | upp | HMPREF9013_0387 | HMPREF9013_1437 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.892 |
| EFC06452.1 | EFC05339.1 | HMPREF9013_1397 | HMPREF9013_1364 | Identified by match to protein family HMM PF00485. | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.635 |
| EFC06452.1 | EFC05450.1 | HMPREF9013_1397 | HMPREF9013_0387 | Identified by match to protein family HMM PF00485. | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF01473; match to protein family HMM PF01832. | 0.928 |
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