STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV14572.1ESX-3 secretion system protein eccC3. (1335 aa)    
Predicted Functional Partners:
ERG69212.1
Type VII secretion integral membrane protein EccD.
 
 
 
 0.999
EFV14571.1
Type VII secretion protein EccB.
 
 
 0.991
ERG69151.1
Type VII secretion integral membrane protein EccD.
 
 
 0.974
EFV14696.2
Type VII secretion protein EccB.
 
 
 0.963
ERG69140.1
Type VII secretion integral membrane protein EccD.
 
 
 0.958
EFV15085.2
Type VII secretion protein EccB.
 
 
 0.919
ERG69152.1
Type VII secretion-associated serine protease mycosin.
 
 
 0.848
EFV14669.1
Type VII secretion protein EccE.
   
 
 0.837
EFV14570.2
Type VII secretion AAA-ATPase EccA.
 
  
 0.828
ERG69142.1
Type VII secretion-associated serine protease mycosin.
 
 
 0.790
Your Current Organism:
Segniliparus rugosus
NCBI taxonomy Id: 679197
Other names: S. rugosus ATCC BAA-974, Segniliparus rugosus ATCC BAA-974, Segniliparus rugosus str. ATCC BAA-974, Segniliparus rugosus strain ATCC BAA-974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.