STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV14532.1Hypothetical protein. (410 aa)    
Predicted Functional Partners:
EFV14534.1
Hypothetical protein.
 
    
0.805
ERG69157.1
Hypothetical protein.
 
    
0.802
EFV14533.1
Hypothetical protein.
 
    
0.798
EFV14535.1
Hypothetical protein.
       0.688
ERG69352.1
Hypothetical protein.
  
 
   0.569
EFV15085.2
Type VII secretion protein EccB.
  
 
   0.564
EFV14394.1
Hypothetical protein.
  
     0.544
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
    0.544
ERG69400.1
Hypothetical protein.
  
     0.530
EFV14871.2
Hypothetical protein.
  
 
   0.510
Your Current Organism:
Segniliparus rugosus
NCBI taxonomy Id: 679197
Other names: S. rugosus ATCC BAA-974, Segniliparus rugosus ATCC BAA-974, Segniliparus rugosus str. ATCC BAA-974, Segniliparus rugosus strain ATCC BAA-974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.