STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV14097.1Hypothetical protein; Belongs to the UPF0337 (CsbD) family. (69 aa)    
Predicted Functional Partners:
EFV14092.1
Hypothetical protein.
 
     0.608
EFV14094.1
Hypothetical protein.
       0.536
EFV14095.2
Hypothetical protein.
       0.536
EFV14460.2
Hypothetical protein.
  
     0.515
EFV14040.2
Hypothetical protein.
  
     0.498
EFV14096.1
Hypothetical protein.
       0.489
EFV14039.1
Hypothetical protein.
  
     0.480
EFV11695.2
FTR1 family protein.
  
     0.451
ERG69357.1
Hypothetical protein.
  
     0.429
ERG69201.1
Pyruvate carboxylase.
       0.407
Your Current Organism:
Segniliparus rugosus
NCBI taxonomy Id: 679197
Other names: S. rugosus ATCC BAA-974, Segniliparus rugosus ATCC BAA-974, Segniliparus rugosus str. ATCC BAA-974, Segniliparus rugosus strain ATCC BAA-974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.