Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFV13741.2 | EFV13908.1 | HMPREF9336_01400 | HMPREF9336_01237 | Hypothetical protein. | Hypothetical protein. | 0.701 |
EFV13741.2 | mca | HMPREF9336_01400 | HMPREF9336_02433 | Hypothetical protein. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.729 |
EFV13741.2 | mshB | HMPREF9336_01400 | HMPREF9336_00542 | Hypothetical protein. | 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.609 |
EFV13741.2 | mshD | HMPREF9336_01400 | HMPREF9336_03384 | Hypothetical protein. | Mycothiol acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.719 |
EFV13907.1 | EFV13908.1 | HMPREF9336_01236 | HMPREF9336_01237 | Hypothetical protein. | Hypothetical protein. | 0.457 |
EFV13907.1 | EFV13909.1 | HMPREF9336_01236 | HMPREF9336_01238 | Hypothetical protein. | Hypothetical protein. | 0.421 |
EFV13908.1 | EFV13741.2 | HMPREF9336_01237 | HMPREF9336_01400 | Hypothetical protein. | Hypothetical protein. | 0.701 |
EFV13908.1 | EFV13907.1 | HMPREF9336_01237 | HMPREF9336_01236 | Hypothetical protein. | Hypothetical protein. | 0.457 |
EFV13908.1 | EFV13909.1 | HMPREF9336_01237 | HMPREF9336_01238 | Hypothetical protein. | Hypothetical protein. | 0.756 |
EFV13908.1 | clpS | HMPREF9336_01237 | HMPREF9336_02787 | Hypothetical protein. | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.483 |
EFV13908.1 | mca | HMPREF9336_01237 | HMPREF9336_02433 | Hypothetical protein. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.772 |
EFV13908.1 | mshA | HMPREF9336_01237 | HMPREF9336_02303 | Hypothetical protein. | D-inositol-3-phosphate glycosyltransferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.484 |
EFV13908.1 | mshB | HMPREF9336_01237 | HMPREF9336_00542 | Hypothetical protein. | 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.749 |
EFV13908.1 | mshC | HMPREF9336_01237 | HMPREF9336_04333 | Hypothetical protein. | L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.543 |
EFV13908.1 | mshD | HMPREF9336_01237 | HMPREF9336_03384 | Hypothetical protein. | Mycothiol acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.784 |
EFV13908.1 | whiB-2 | HMPREF9336_01237 | HMPREF9336_01592 | Hypothetical protein. | Hypothetical protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.467 |
EFV13909.1 | EFV13907.1 | HMPREF9336_01238 | HMPREF9336_01236 | Hypothetical protein. | Hypothetical protein. | 0.421 |
EFV13909.1 | EFV13908.1 | HMPREF9336_01238 | HMPREF9336_01237 | Hypothetical protein. | Hypothetical protein. | 0.756 |
clpS | EFV13908.1 | HMPREF9336_02787 | HMPREF9336_01237 | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Hypothetical protein. | 0.483 |
clpS | mca | HMPREF9336_02787 | HMPREF9336_02433 | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.526 |
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