STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV13682.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
EFV11797.1
Trehalose-phosphatase.
 
 0.693
EFV12860.2
Hypothetical protein.
    
   0.624
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.624
EFV14167.1
Malto-oligosyltrehalose trehalohydrolase.
   
  0.528
EFV14047.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.526
EFV13681.1
Hypothetical protein.
  
    0.509
EFV13109.1
UDP-galactopyranose mutase.
  
 
  0.484
EFV14050.2
TIGR02611 family protein.
  
     0.462
EFV12191.1
Hypothetical protein.
 
  0.429
EFV12905.1
Hypothetical protein.
    
  0.426
Your Current Organism:
Segniliparus rugosus
NCBI taxonomy Id: 679197
Other names: S. rugosus ATCC BAA-974, Segniliparus rugosus ATCC BAA-974, Segniliparus rugosus str. ATCC BAA-974, Segniliparus rugosus strain ATCC BAA-974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.