STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV13443.1Fluoroquinolones export permease. (236 aa)    
Predicted Functional Partners:
EFV13444.2
Fluoroquinolones export permease.
 
 
  0.997
EFV13442.1
Fluoroquinolones export ATP-binding protein.
 
 
 0.979
EFV13993.1
Hypothetical protein.
  
     0.772
EFV14580.1
Hypothetical protein.
 
     0.755
EFV15024.1
Hypothetical protein.
  
     0.733
EFV13672.1
Hypothetical protein.
  
     0.730
EFV15029.1
Hypothetical protein.
  
     0.720
EFV14576.1
Hypothetical protein.
  
     0.700
ERG69151.1
Type VII secretion integral membrane protein EccD.
  
     0.692
EFV14571.1
Type VII secretion protein EccB.
  
     0.676
Your Current Organism:
Segniliparus rugosus
NCBI taxonomy Id: 679197
Other names: S. rugosus ATCC BAA-974, Segniliparus rugosus ATCC BAA-974, Segniliparus rugosus str. ATCC BAA-974, Segniliparus rugosus strain ATCC BAA-974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.