STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV13070.14-oxalocrotonate tautomerase family enzyme. (65 aa)    
Predicted Functional Partners:
EFV14460.2
Hypothetical protein.
    
 0.526
EFV11652.2
Hypothetical protein.
       0.505
EFV12072.1
Hypothetical protein.
  
     0.477
EFV12392.1
Hypothetical protein.
 
  
 0.464
EFV12442.2
Hypothetical protein.
    
 0.462
ERG69427.1
Hypothetical protein.
  
  
 0.436
EFV12071.1
Hypothetical protein.
  
     0.434
hisC
Histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
  0.405
EFV11650.1
Histidinol-phosphate transaminase.
    
  0.405
Your Current Organism:
Segniliparus rugosus
NCBI taxonomy Id: 679197
Other names: S. rugosus ATCC BAA-974, Segniliparus rugosus ATCC BAA-974, Segniliparus rugosus str. ATCC BAA-974, Segniliparus rugosus strain ATCC BAA-974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.