STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV12345.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
EFV15095.2
Hypothetical protein.
  
 
 0.727
ERG69350.1
Hypothetical protein.
  
 
 0.727
ERG69351.1
Hypothetical protein.
  
 
 0.727
ERG69408.1
Hypothetical protein.
  
 
 0.727
EFV14690.2
Hypothetical protein.
  
 0.665
EFV12344.1
Hypothetical protein.
       0.634
EFV11748.1
Hypothetical protein.
  
     0.589
EFV12905.1
Hypothetical protein.
    
  0.548
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
  0.494
EFV14874.1
Hypothetical protein.
  
     0.489
Your Current Organism:
Segniliparus rugosus
NCBI taxonomy Id: 679197
Other names: S. rugosus ATCC BAA-974, Segniliparus rugosus ATCC BAA-974, Segniliparus rugosus str. ATCC BAA-974, Segniliparus rugosus strain ATCC BAA-974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.