Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHG23168.1 | EHG23409.1 | HMPREF9332_00920 | HMPREF9332_00692 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Hypothetical protein; Belongs to the peptidase C1 family. | 0.635 |
EHG23168.1 | EHG24811.1 | HMPREF9332_00920 | HMPREF9332_00076 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Hypothetical protein. | 0.672 |
EHG23409.1 | EHG23168.1 | HMPREF9332_00692 | HMPREF9332_00920 | Hypothetical protein; Belongs to the peptidase C1 family. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.635 |
EHG23409.1 | EHG24811.1 | HMPREF9332_00692 | HMPREF9332_00076 | Hypothetical protein; Belongs to the peptidase C1 family. | Hypothetical protein. | 0.571 |
EHG24093.1 | EHG24811.1 | HMPREF9332_00294 | HMPREF9332_00076 | Hypothetical protein; Belongs to the CinA family. | Hypothetical protein. | 0.540 |
EHG24810.1 | EHG24811.1 | HMPREF9332_00075 | HMPREF9332_00076 | Hypothetical protein. | Hypothetical protein. | 0.776 |
EHG24810.1 | pyrG | HMPREF9332_00075 | HMPREF9332_00078 | Hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.601 |
EHG24810.1 | yidC | HMPREF9332_00075 | HMPREF9332_00077 | Hypothetical protein. | Hypothetical protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.591 |
EHG24811.1 | EHG23168.1 | HMPREF9332_00076 | HMPREF9332_00920 | Hypothetical protein. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.672 |
EHG24811.1 | EHG23409.1 | HMPREF9332_00076 | HMPREF9332_00692 | Hypothetical protein. | Hypothetical protein; Belongs to the peptidase C1 family. | 0.571 |
EHG24811.1 | EHG24093.1 | HMPREF9332_00076 | HMPREF9332_00294 | Hypothetical protein. | Hypothetical protein; Belongs to the CinA family. | 0.540 |
EHG24811.1 | EHG24810.1 | HMPREF9332_00076 | HMPREF9332_00075 | Hypothetical protein. | Hypothetical protein. | 0.776 |
EHG24811.1 | guaB | HMPREF9332_00076 | HMPREF9332_01779 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.485 |
EHG24811.1 | pyrG | HMPREF9332_00076 | HMPREF9332_00078 | Hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.666 |
EHG24811.1 | yidC | HMPREF9332_00076 | HMPREF9332_00077 | Hypothetical protein. | Hypothetical protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.666 |
guaB | EHG24811.1 | HMPREF9332_01779 | HMPREF9332_00076 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Hypothetical protein. | 0.485 |
guaB | pyrG | HMPREF9332_01779 | HMPREF9332_00078 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.772 |
guaB | yidC | HMPREF9332_01779 | HMPREF9332_00077 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Hypothetical protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.471 |
pyrG | EHG24810.1 | HMPREF9332_00078 | HMPREF9332_00075 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | Hypothetical protein. | 0.601 |
pyrG | EHG24811.1 | HMPREF9332_00078 | HMPREF9332_00076 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | Hypothetical protein. | 0.666 |
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