Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHG24134.1 | EHG24135.1 | HMPREF9332_00335 | HMPREF9332_00336 | DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...] | Hypothetical protein. | 0.971 |
| EHG24134.1 | EHG24138.1 | HMPREF9332_00335 | HMPREF9332_00339 | DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...] | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.732 |
| EHG24134.1 | EHG24139.1 | HMPREF9332_00335 | HMPREF9332_00340 | DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...] | Hypothetical protein. | 0.629 |
| EHG24134.1 | EHG24140.1 | HMPREF9332_00335 | HMPREF9332_00341 | DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...] | Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.750 |
| EHG24134.1 | nusA | HMPREF9332_00335 | HMPREF9332_01555 | DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...] | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.436 |
| EHG24134.1 | rpoA | HMPREF9332_00335 | HMPREF9332_01892 | DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...] | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.418 |
| EHG24135.1 | EHG24134.1 | HMPREF9332_00336 | HMPREF9332_00335 | Hypothetical protein. | DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...] | 0.971 |
| EHG24135.1 | EHG24138.1 | HMPREF9332_00336 | HMPREF9332_00339 | Hypothetical protein. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.833 |
| EHG24135.1 | EHG24139.1 | HMPREF9332_00336 | HMPREF9332_00340 | Hypothetical protein. | Hypothetical protein. | 0.813 |
| EHG24135.1 | EHG24140.1 | HMPREF9332_00336 | HMPREF9332_00341 | Hypothetical protein. | Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.669 |
| EHG24135.1 | EHG24806.1 | HMPREF9332_00336 | HMPREF9332_00071 | Hypothetical protein. | Hypothetical protein. | 0.534 |
| EHG24138.1 | EHG24134.1 | HMPREF9332_00339 | HMPREF9332_00335 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...] | 0.732 |
| EHG24138.1 | EHG24135.1 | HMPREF9332_00339 | HMPREF9332_00336 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Hypothetical protein. | 0.833 |
| EHG24138.1 | EHG24139.1 | HMPREF9332_00339 | HMPREF9332_00340 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Hypothetical protein. | 0.852 |
| EHG24138.1 | EHG24140.1 | HMPREF9332_00339 | HMPREF9332_00341 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.689 |
| EHG24139.1 | EHG24134.1 | HMPREF9332_00340 | HMPREF9332_00335 | Hypothetical protein. | DNA polymerase III; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...] | 0.629 |
| EHG24139.1 | EHG24135.1 | HMPREF9332_00340 | HMPREF9332_00336 | Hypothetical protein. | Hypothetical protein. | 0.813 |
| EHG24139.1 | EHG24138.1 | HMPREF9332_00340 | HMPREF9332_00339 | Hypothetical protein. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.852 |
| EHG24139.1 | EHG24140.1 | HMPREF9332_00340 | HMPREF9332_00341 | Hypothetical protein. | Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.701 |
| EHG24139.1 | EHG24263.1 | HMPREF9332_00340 | HMPREF9332_00464 | Hypothetical protein. | Hypothetical protein; Belongs to the sulfur carrier protein TusA family. | 0.462 |
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