STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG24280.1Methylaspartate ammonia-lyase. (414 aa)    
Predicted Functional Partners:
glmE
Methylaspartate mutase; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  
 0.976
glmS
Hypothetical protein; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  
  0.967
EHG24278.1
Hypothetical protein.
 
     0.900
EHG24281.1
Hypothetical protein.
 
     0.806
EHG24282.1
Hypothetical protein.
 
     0.637
Your Current Organism:
Alloprevotella rava
NCBI taxonomy Id: 679199
Other names: A. rava F0323, Alloprevotella rava F0323, Prevotella sp. oral taxon 302 str. F0323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.